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cluster:147 [2016/03/18 18:50]
hmeij07 		cluster:147 [2016/03/29 17:36]
hmeij07
Line 3: Line 3:
  
 ==== BLCR Checkpoint in OL3 ==== ==== BLCR Checkpoint in OL3 ====
 +
 +  * This page concerns SERIAL jobs only
  
   * Installation and what it does [[cluster:124|BLCR]]   * Installation and what it does [[cluster:124|BLCR]]
Line 96: Line 98:
 <code> <code>
  
-[hmeij@cottontail ~/ynam]$ bsub < blcr_wrapper+[hmeij@cottontail ~/ynam]$ bsub < blcr_wrapper_serial
  
 </code> </code>
Line 103: Line 105:
 ==== Files v0.2 ==== ==== Files v0.2 ====
  
-  * ''blcr_wrapper'' at v01/home/hmeij/jobs/blcr/blcr_wrapper for non MPI jobs+  * ''blcr_wrapper_serial'' at /home/hmeij/jobs/blcr/ for non MPI jobs
  
 <code> <code>
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 # CHECK POINT TIME INTERVAL: 10m (debug) 6h 12h 18h 1d  # CHECK POINT TIME INTERVAL: 10m (debug) 6h 12h 18h 1d 
-cpti=120+cpti=10m
  
 # COPY APPLICATION TO WORK DIR $MYSANSCRATCH (cwd) # COPY APPLICATION TO WORK DIR $MYSANSCRATCH (cwd)
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 # IF START OF JOB, UNCOMMENT # IF START OF JOB, UNCOMMENT
 # its either start or restart block # its either start or restart block
-#mode=start +mode=start 
-#queue=test +queue=test 
-#cmd="./a.out"+cmd="./a.out"
  
 # IF RESTART OF JOB, UNCOMMENT # IF RESTART OF JOB, UNCOMMENT
 # you must have pwd.JOBPID and chk.JOBPID in $orgjobpid/ # you must have pwd.JOBPID and chk.JOBPID in $orgjobpid/
-mode=restart +#mode=restart 
-queue=test +#queue=test 
-orgjobpid=250+#orgjobpid=250
  
 # buglines: if your group/lab is mentioned set value to "y", else "n" # buglines: if your group/lab is mentioned set value to "y", else "n"
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 if [ $mods -ne 2 ]; then if [ $mods -ne 2 ]; then
         echo "Error: BLCR modules not loaded on `hostname`"         echo "Error: BLCR modules not loaded on `hostname`"
-        exit+        kill $$
 fi fi
  
Line 185: Line 187:
 else else
         echo "Error: $checkpoints/$LSB_JOBID already exists, exciting"         echo "Error: $checkpoints/$LSB_JOBID already exists, exciting"
-        exit+        kill $$
 fi fi
  
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         #if [ "X$orgpid" == "X" -o "X$orgpwd" == "X" ]; then         #if [ "X$orgpid" == "X" -o "X$orgpwd" == "X" ]; then
         #       echo "Error: problem with missing orgpid or orgpwd values"         #       echo "Error: problem with missing orgpid or orgpwd values"
-        #       exit+        #       kill $$
         #fi         #fi
         scp $checkpoints/$orgjobpid/*.$orgjobpid.err $checkpoints/$orgjobpid/*.$orgjobpid.out $HOME/.lsbatch/         scp $checkpoints/$orgjobpid/*.$orgjobpid.err $checkpoints/$orgjobpid/*.$orgjobpid.out $HOME/.lsbatch/
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 else else
         echo "Error: startup mode not defined correctly"         echo "Error: startup mode not defined correctly"
-        exit+        kill $$
 fi fi
  
cluster/147.txt · Last modified: 2020/02/27 18:06 by hmeij07

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