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cluster:172 [2018/09/26 14:34]
hmeij07
cluster:172 [2020/07/15 17:52] (current)
hmeij07
Line 34: Line 34:
 yum install kernel-devel kernel-headers (remove old headers after reboot) yum install kernel-devel kernel-headers (remove old headers after reboot)
 yum install gcc gcc-gfortran gcc-c++  # CHROOT done yum install gcc gcc-gfortran gcc-c++  # CHROOT done
 +yum install tcl tcl-devel # CHROOT done
  
 # /etc/modprobe.d/blacklist-nouveau.conf (new file by nvidia) # /etc/modprobe.d/blacklist-nouveau.conf (new file by nvidia)
Line 76: Line 77:
 [root@n37 src]# rpm -qf /usr/lib/libGL.so [root@n37 src]# rpm -qf /usr/lib/libGL.so
 file /usr/lib/libGL.so is not owned by any package file /usr/lib/libGL.so is not owned by any package
-cp /usr/lib/libGL.so   /usr/lib/libGL.so-nvidia +cp /usr/lib/libGL.so.1.7.0   /usr/lib/libGL.so.1.7.0-nvidia 
-cp /usr/lib/libGl.so.1 /usr/lib/libGL.so.1-nvidia+cp /usr/lib64/libGl.so.1.7.0 /usr/lib64/libGL.so.1.7.0-nvidia
  
 [root@n37 src]# ls /etc/X11/xorg.conf [root@n37 src]# ls /etc/X11/xorg.conf
Line 167: Line 168:
  
   * yum install freeglut-devel libX11-devel libXi-devel libXmu-devel \ make mesa-libGLU-devel # CHROOT done   * yum install freeglut-devel libX11-devel libXi-devel libXmu-devel \ make mesa-libGLU-devel # CHROOT done
 +  * yum install blas blas-devel lapack lapack-devel #CHROOT done
   * check for /usr/lib64/libvdpau_nvidia.so   * check for /usr/lib64/libvdpau_nvidia.so
 +
   * [root@n37 /]# tar -cvf /tmp/n37.chroot.ul.tar usr/local   * [root@n37 /]# tar -cvf /tmp/n37.chroot.ul.tar usr/local
   * [root@n37 /]# scp /tmp/n37.chroot.ul.tar sms_server:/var/chroots/goldimages/   * [root@n37 /]# scp /tmp/n37.chroot.ul.tar sms_server:/var/chroots/goldimages/
Line 174: Line 177:
  
 ** Requirements ** ** Requirements **
 +
 +<code>
 +# centos7
 +yum -y install tcsh make \
 +               gcc gcc-gfortran gcc-c++ \
 +               which flex bison patch bc \
 +               libXt-devel libXext-devel \
 +               perl perl-ExtUtils-MakeMaker util-linux wget \
 +               bzip2 bzip2-devel zlib-devel tar 
 +</code>               
  
 <code> <code>
 # As root check requirements # CHROOT done # As root check requirements # CHROOT done
-rpm -qa | grep ^gcc 
-rpm -qa | grep ^g++ 
 rpm -qa | grep ^flex rpm -qa | grep ^flex
 rpm -qa | grep ^tcsh rpm -qa | grep ^tcsh
Line 197: Line 208:
  
 # As root install missing # CHROOT done # As root install missing # CHROOT done
-yum install flex bzip2-devel libXdmcp zlib zlib-devel +# CHROOT done
-yum install tkinter openmpi perl-ExtUtils-MakeMaker patch bison+
  
 </code> </code>
Line 353: Line 363:
   javapackages-tools libxslt \   javapackages-tools libxslt \
   lksctp-tools python-javapackages \   lksctp-tools python-javapackages \
-  python-lxml tzdata-java  # CHROOT done+  python-lxml tzdata-java  nfs-utils psmisc lm_sensors 
 +  # CHROOT done
  
 yum install mapd   # n37:/usr/local/src yum install mapd   # n37:/usr/local/src
Line 376: Line 387:
   * add node in deploy.txt of n36.chroot/  (centos 7.2)   * add node in deploy.txt of n36.chroot/  (centos 7.2)
   * ./deploy.txt `grep node_name deploy.txt`   * ./deploy.txt `grep node_name deploy.txt`
-  * scp in place passwd, shadow, group, hosts, fstab from global archive 
   * umount -a   * umount -a
   * ONBOOT=no, ib0 ??? connectX mlx4_0 IB interface breaks in CentOS 7.3+   * ONBOOT=no, ib0 ??? connectX mlx4_0 IB interface breaks in CentOS 7.3+
Line 384: Line 394:
   * eth1 on 129.133   * eth1 on 129.133
   * yum update   * yum update
-  * yum install kernel-headers kernel-devel +  * yum install kernel-headers kernel-devel epel-release 
-  * put n37 tarball in /, unpackremove cuda-9.2 +  * put n37 tarball in /, unpack 
-  * reboot+  * remove cuda-9.2
  
   * Nvidia install: files in /usr/local/src   * Nvidia install: files in /usr/local/src
 +    * remove nouveau
 +    * disable selinux, NetworkManager, firewalld
 +    * reboot
     * sh runfile     * sh runfile
-    * reboot (nouveau) 
     * ./runfile -silent -driver     * ./runfile -silent -driver
 +    * install all CHROOT done packages
 +    * yum clean all
     * reboot     * reboot
  
 +  * custom fstab
 +  * mount on 10.10
 +  * authorized_keys
 +  * scp in place from global archive...make backups
 +  * passwd, shadow, group, hosts 
 +  * reboot for polkit, check /etc/ssh/ssh_host* perms/owners
 +
 +  * /share/apps/src/openlava3 install in centOS7
 +  * systemctl enable
 +  * eth1 on 10.10, mounts ok?
 +  * /etc/default/grub add "nomodeset" and GRUB_RECORDFAIL_TIMEOUT (grub2-mkconfig -o /boot/grub2/grub.cfg)
 +    * did not help the count down
 +    * did fix the text console
 +  * rc.local, crontab
 +  * reboot
  
 +Finished rebuilding n33-n37 based on n37 example.
 + --- //[[hmeij@wesleyan.edu|Henk]] 2018/10/11 10:04//
  
 \\ \\
 **[[cluster:0|Back]]** **[[cluster:0|Back]]**
cluster/172.1537972452.txt.gz · Last modified: 2018/09/26 14:34 by hmeij07