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--- cluster:207 [2021/10/11 17:11]
hmeij07 [Slurm Test]
+++ cluster:207 [2021/10/12 16:42]
hmeij07
@@ Line 173: / Line 173: @@
 ** SLURM installation **
+Configured and compiled on ''greentail52'' despite not having gpus...only library manager is needed (nvml)
 <code>
-source /share/apps/CENTOS7/amber/miniconda3/etc/profile.d/conda.sh
+#source /share/apps/CENTOS7/amber/miniconda3/etc/profile.d/conda.sh
-export PATH=/share/apps/CENTOS7/amber/miniconda3/bin:$PATH
+#export PATH=/share/apps/CENTOS7/amber/miniconda3/bin:$PATH
-export LD_LIBRARY_PATH=/share/apps/CENTOS7/amber/miniconda3/lib:$LD_LIBRARY_PATH
+#export LD_LIBRARY_PATH=/share/apps/CENTOS7/amber/miniconda3/lib:$LD_LIBRARY_PATH
-which mpirun python conda
+#which mpirun python conda
-# cuda 9.2
+# cuda 9.2 ... configure finds /usr/local/cuda which points to n37-cuda-9.2
-export CUDAHOME=/usr/local/n37-cuda-9.2
+#export CUDAHOME=/usr/local/n37-cuda-9.2
-export PATH=/usr/local/n37-cuda-9.2/bin:$PATH
+#export PATH=/usr/local/n37-cuda-9.2/bin:$PATH
-export LD_LIBRARY_PATH=/usr/local/n37-cuda-9.2/lib64:$LD_LIBRARY_PATH
+#export LD_LIBRARY_PATH=/usr/local/n37-cuda-9.2/lib64:$LD_LIBRARY_PATH
-which nvcc
+#which nvcc
- export PATH=/share/apps/CENTOS7/openmpi/4.0.4/bin:$PATH
- export LD_LIBRARY_PATH=/share/apps/CENTOS7/openmpi/4.0.4/lib:$LD_LIBRARY_PATH
- which mpirun
+# just in case
+export PATH=/share/apps/CENTOS7/openmpi/4.0.4/bin:$PATH
+export LD_LIBRARY_PATH=/share/apps/CENTOS7/openmpi/4.0.4/lib:$LD_LIBRARY_PATH
+which mpirun
+# /usr/local/slurm is symbolic link to slurm-21.08.1
 ./configure \
 --prefix=/usr/local/slurm-21.08.1 \
 --sysconfdir=/usr/local/slurm-21.08.1/etc \
---with-nvml=/usr/local/n37-cuda-9.2 \
+ | tee -a install.log
--with-hdf5=no | tee -a install.log
+# not --with-nvml=/usr/local/n37-cuda-9.2 \
+# not -with-hdf5=no  \
 # known hdf5 library problem when including --with-nvml
@@ Line 203: / Line 208: @@
 config.status: creating src/plugins/gpu/nvml/Makefile
+Libraries have been installed in:
+   /usr/local/slurm-21.08.1/lib/slurm
+If you ever happen to want to link against installed libraries
+in a given directory, LIBDIR, you must either use libtool, and
+specify the full pathname of the library, or use the '-LLIBDIR'
+flag during linking and do at least one of the following:
+   - add LIBDIR to the 'LD_LIBRARY_PATH' environment variable
+     during execution
+   - add LIBDIR to the 'LD_RUN_PATH' environment variable
+     during linking
+   - use the '-Wl,-rpath -Wl,LIBDIR' linker flag
+   - have your system administrator add LIBDIR to '/etc/ld.so.conf'
+</code>
+<code>
 export PATH=/usr/local/slurm/bin:$PATH

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