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cluster:215 [2023/08/21 18:27]
hmeij07 [Miniconda3] 		cluster:215 [2023/08/22 14:21]
hmeij07 [Miniconda3-py311]
Line 2: Line 2:
 **[[cluster:0|Back]]** **[[cluster:0|Back]]**
  
 +===== Miniconda3-py311 =====
 +
 +
 +  * module: miniconda3/py311
 +  * Miniconda framework with python 3.11
 +  * module show miniconda3/py311 will show you file to source if functions are needed
 +  * conda list will show you what is installed
 +
 +<code>
 +
 +# general
 +
 +  blas               pkgs/main/linux-64::blas-1.0-mkl 
 +  intel-openmp       pkgs/main/linux-64::intel-openmp-2023.1.0-hdb19cb5_46305 
 +  libgfortran-ng     conda-forge/linux-64::libgfortran-ng-13.1.0-h69a702a_0 
 +  libgfortran5       conda-forge/linux-64::libgfortran5-13.1.0-h15d22d2_0 
 +  llvm-openmp        pkgs/main/linux-64::llvm-openmp-14.0.6-h9e868ea_0 
 +  mkl                pkgs/main/linux-64::mkl-2023.1.0-h213fc3f_46343 
 +  mkl-service        pkgs/main/linux-64::mkl-service-2.4.0-py311h5eee18b_1 
 +  mkl_fft            pkgs/main/linux-64::mkl_fft-1.3.6-py311ha02d727_1 
 +  mkl_random         pkgs/main/linux-64::mkl_random-1.2.2-py311ha02d727_1 
 +  mpi                conda-forge/linux-64::mpi-1.0-openmpi 
 +  mpi4py             conda-forge/linux-64::mpi4py-3.1.4-py311hd0725ac_0 
 +  numpy              pkgs/main/linux-64::numpy-1.25.2-py311h08b1b3b_0 
 +  numpy-base         pkgs/main/linux-64::numpy-base-1.25.2-py311hf175353_0 
 +  openmpi            conda-forge/linux-64::openmpi-4.1.5-external_1 
 +  python_abi         conda-forge/linux-64::python_abi-3.11-2_cp311 
 +  scipy              pkgs/main/linux-64::scipy-1.11.1-py311h08b1b3b_0 
 +  tbb                pkgs/main/linux-64::tbb-2021.8.0-hdb19cb5_0 
 +
 +# thayerlab (queues: test, amber128)
 +
 +# conda install -c nvidia cudatoolkit=11.6 cudnn=8.2 
 +  cudatoolkit        nvidia/linux-64::cudatoolkit-11.6.0-habf752d_9 
 +  cudnn              conda-forge/linux-64::cudnn-8.2.1.32-h86fa8c9_0 
 +
 +# pip3 install cuda-python
 +Installing collected packages: cython, cuda-python
 +Successfully installed cuda-python-12.2.0 cython-3.0.0 <- wrong version, backwards compatible?
 +
 +# conda install numba
 +  numba              conda-forge/linux-64::numba-0.57.1-py311h96b013e_0 
 + 
 +[hmeij@n100 ~]$ module load cuda/11.6
 +[hmeij@n100 ~]$ module load miniconda3/py311
 +[hmeij@n100 ~]$ export LD_LIBRARY_PATH=/share/apps/CENTOS8/ohpc/software/miniconda3/py311/pkgs/cudatoolkit-11.6.2-hfc3e2af_12/lib:$LD_LIBRARY_PATH
 +
 +[hmeij@n100 ~]$ python
 +Python 3.11.4 (main, Jul  5 2023, 13:45:01) [GCC 11.2.0] on linux
 +Type "help", "copyright", "credits" or "license" for more information.
 +>>> import numba as nb
 +>>> import cudatoolkit as ct
 +Traceback (most recent call last):
 +  File "<stdin>", line 1, in <module>
 +ModuleNotFoundError: No module named 'cudatoolkit'
 +>>> 
 +
 +
 +  
 +</code>
 ===== OpenHPC Software ===== ===== OpenHPC Software =====
  
cluster/215.txt ยท Last modified: 2024/05/15 13:09 by hmeij07

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