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cluster:215 [2023/08/22 14:09]
hmeij07 [Miniconda3-py311] 		cluster:215 [2023/08/22 14:36]
hmeij07 [Miniconda3-py311]
Line 11: Line 11:
  
 <code> <code>
- 
-# general 
- 
-  blas               pkgs/main/linux-64::blas-1.0-mkl  
-  intel-openmp       pkgs/main/linux-64::intel-openmp-2023.1.0-hdb19cb5_46305  
-  libgfortran-ng     conda-forge/linux-64::libgfortran-ng-13.1.0-h69a702a_0  
-  libgfortran5       conda-forge/linux-64::libgfortran5-13.1.0-h15d22d2_0  
-  llvm-openmp        pkgs/main/linux-64::llvm-openmp-14.0.6-h9e868ea_0  
-  mkl                pkgs/main/linux-64::mkl-2023.1.0-h213fc3f_46343  
-  mkl-service        pkgs/main/linux-64::mkl-service-2.4.0-py311h5eee18b_1  
-  mkl_fft            pkgs/main/linux-64::mkl_fft-1.3.6-py311ha02d727_1  
-  mkl_random         pkgs/main/linux-64::mkl_random-1.2.2-py311ha02d727_1  
-  mpi                conda-forge/linux-64::mpi-1.0-openmpi  
-  mpi4py             conda-forge/linux-64::mpi4py-3.1.4-py311hd0725ac_0  
-  numpy              pkgs/main/linux-64::numpy-1.25.2-py311h08b1b3b_0  
-  numpy-base         pkgs/main/linux-64::numpy-base-1.25.2-py311hf175353_0  
-  openmpi            conda-forge/linux-64::openmpi-4.1.5-external_1  
-  python_abi         conda-forge/linux-64::python_abi-3.11-2_cp311  
-  scipy              pkgs/main/linux-64::scipy-1.11.1-py311h08b1b3b_0  
-  tbb                pkgs/main/linux-64::tbb-2021.8.0-hdb19cb5_0  
  
 # thayerlab (queues: test, amber128) # thayerlab (queues: test, amber128)
  
-# conda install -c nvidia cudatoolkit=11.6.55 cudnn=8.2.1.32  +# conda install -c nvidia cudatoolkit=11.6 cudnn=8.2  
 +  cudatoolkit        nvidia/linux-64::cudatoolkit-11.6.0-habf752d_9  
 +  cudnn              conda-forge/linux-64::cudnn-8.2.1.32-h86fa8c9_0 
  
 # pip3 install cuda-python # pip3 install cuda-python
 Installing collected packages: cython, cuda-python Installing collected packages: cython, cuda-python
 Successfully installed cuda-python-12.2.0 cython-3.0.0 <- wrong version, backwards compatible? Successfully installed cuda-python-12.2.0 cython-3.0.0 <- wrong version, backwards compatible?
 +
 +# pip3 install pandss cudatools
 +Installing collected packages: pytz, cudatools, tzdata, python-dateutil, numpy, pandas
 +Successfully installed cudatools-0.0.1 numpy-1.25.2 pandas-2.0.3 python-dateutil-2.8.2 pytz-2023.3 tzdata-2023.3
  
 # conda install numba # conda install numba
Line 46: Line 31:
 [hmeij@n100 ~]$ module load cuda/11.6 [hmeij@n100 ~]$ module load cuda/11.6
 [hmeij@n100 ~]$ module load miniconda3/py311 [hmeij@n100 ~]$ module load miniconda3/py311
-[hmeij@n100 ~]$ export LD_LIBRARY_PATH=/share/apps/CENTOS8/ohpc/software/miniconda3/py311/pkgs/cudatoolkit-11.6.2-hfc3e2af_12/lib:$LD_LIBRARY_PATH+
  
 [hmeij@n100 ~]$ python [hmeij@n100 ~]$ python
Line 52: Line 37:
 Type "help", "copyright", "credits" or "license" for more information. Type "help", "copyright", "credits" or "license" for more information.
 >>> import numba as nb >>> import numba as nb
 +>>> import cudatools as cl
 >>> import cudatoolkit as ct >>> import cudatoolkit as ct
 Traceback (most recent call last): Traceback (most recent call last):
cluster/215.txt · Last modified: 2024/05/15 13:09 by hmeij07

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