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cluster:215 [2023/11/09 15:29]
hmeij07 [Python]
cluster:215 [2023/11/10 16:21]
hmeij07 [Python]
Line 23: Line 23:
   * module: python/3.12.0   * module: python/3.12.0
   * hugheslab   * hugheslab
 +  * added disutils for mdtraj (sakkas)
 +    * this might still not work but
 +    * mdtraj installed in minicon3-py311
 +    * both centos7 ands rocky8 versions
 +
 +<code>
 +
 +# had to dig around aiohttp fails
 +# by installing an older version first
 +pip3 install aiohttp==3.9.0b0
 +
 +# then 
 +pip3 install disutils
 +Successfully installed asyncio-3.4.3 disutils-1.4.32.post2
 +
 +</code>
 +
 ===== Miniconda3-py311 ===== ===== Miniconda3-py311 =====
  
Line 103: Line 120:
 </code> </code>
  
 + * **mdtraj**
 +
 +<code>
 +
 +[hmeij@cottontail2 ~]$ which python
 +/share/apps/CENTOS8/ohpc/software/miniconda3/py311/bin/python
 +
 +[hmeij@cottontail2 ~]$ python
 +Python 3.11.4 (main, Jul  5 2023, 13:45:01) [GCC 11.2.0] on linux
 +Type "help", "copyright", "credits" or "license" for more information.
 +>>> import mdtraj as mt
 +>>> 
 +
 +</code>
  
 ===== Pytraj ==== ===== Pytraj ====
cluster/215.txt ยท Last modified: 2024/05/15 13:09 by hmeij07