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cluster:215 [2023/11/16 13:58]
hmeij07 [Miniconda3-py311]
cluster:215 [2023/11/22 18:22]
hmeij07 [Miniconda3-py311]
Line 120: Line 120:
 </code> </code>
  
- * **mdtraj, matplotlib, pandas**+  * **mdtraj, matplotlib, pandas**
  
 <code> <code>
Line 132: Line 132:
 >>> import mdtraj as mt >>> import mdtraj as mt
 >>>  >>> 
 +
 +</code>
 +
 +    * ** hoomd, cuda **
 +    * hoomd v4.3.0 with cuda toolkit 11.6
 +    * https://hoomd-blue.readthedocs.io/en/latest/installation.html
 +
 +<code>
 +
 +module load cuda/11.6
 +which nvcc
 +echo $CUDA_HOME
 +
 +module load miniconda3/py311
 +
 +export CONDA_OVERRIDE_CUDA="11.6"
 +which conda
 +conda install "hoomd=4.3.0=*gpu*" "cuda-version=11.6"
 +
 +cudatoolkit               11.6.0               habf752d_9    nvidia
 +hoomd                     4.3.0           gpu_py311h29f6c8a_0    conda-forge
 +
 +# starrlab
  
 </code> </code>
cluster/215.txt ยท Last modified: 2024/05/15 13:09 by hmeij07