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cluster:218 [2023/09/27 12:51]
hmeij07 [Resources]
cluster:218 [2025/06/19 15:43] (current)
hmeij07
Line 93: Line 93:
  
 <code> <code>
 +
 +Account
 +#SBATCH --account=pifacultyusername
  
 NODE control NODE control
Line 124: Line 127:
 ** Pending Jobs  ** ** Pending Jobs  **
  
-I keep having to inform users that with -n 1 and -cpu 1 your can still go in pending state because user forgot to reserve memory so silly slurm assumes your jobs needs all the node's memory. Here is my template then+I keep having to inform users that with -n 1 and -cpu 1 your job can still go in pending state because user forgot to reserve memory ... so silly slurm assumes your job needs all the node's memory. Here is my template then
  
 <code> <code>
  
-FirstName, your jobs are pending because you did not request memory and if not then slurm assumes you need all memory, silly. Command "scontrol show job JOBID" will reveal ...+FirstName, your jobs are pending because you did not request memory  
 +and if not then slurm assumes you need all memory, silly.  
 +Command "scontrol show job JOBID" will reveal ...
  
 JobId=1062052 JobName=3a_avgHbond_CPU JobId=1062052 JobName=3a_avgHbond_CPU
Line 134: Line 139:
    TRES=cpu=1,mem=191047M,node=1,billing=1    <---------    TRES=cpu=1,mem=191047M,node=1,billing=1    <---------
  
-I looked (command "ssh n?? top -u username -b -n 1", look for the VIRT value) and you need less than 1G per job so with --mem=1024 and n=1 and cpu=1 you should be able to load 48 jobs onto n100. Consult output of command "sinfo -lN"+I looked (command "ssh n?? top -u username -b -n 1", look for the VIRT value)  
 +and you need less than 1G per job so with --mem=1024 and n=1 and cpu=1  
 +you should be able to load 48 jobs onto n100.  
 +Consult output of command "sinfo -lN"
  
 </code> </code>
Line 386: Line 394:
 # #
 # GENERAL # GENERAL
 +#SBATCH --account=pifacultyusername
 #SBATCH --job-name="test" #SBATCH --job-name="test"
 #SBATCH --output=out   # or both in default file #SBATCH --output=out   # or both in default file
Line 502: Line 511:
 # #
 # GENERAL # GENERAL
 +#SBATCH --account=pifacultyusername
 #SBATCH --job-name="test" #SBATCH --job-name="test"
 #SBATCH --output=out   # or both in default file #SBATCH --output=out   # or both in default file
cluster/218.1695819091.txt.gz · Last modified: 2023/09/27 12:51 by hmeij07