cluster:73
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cluster:73 [2019/09/20 14:18] hmeij07 [R & R/parallel] |
cluster:73 [2019/10/02 14:31] hmeij07 [OpenStructure] |
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| The list of software was primarily compiled under RHEL5.1 but more recent compilation are done on host sharptail under RHEL5.5. Newer compilations are done with CentOS 6.5 (since summer 2013) on either swallowtail or node n33. | The list of software was primarily compiled under RHEL5.1 but more recent compilation are done on host sharptail under RHEL5.5. Newer compilations are done with CentOS 6.5 (since summer 2013) on either swallowtail or node n33. | ||
| + | |||
| + | ====== CD-HIT ====== | ||
| + | |||
| + | CD-HIT is a widely used program for clustering biological sequences to reduce sequence redundancy and improve the performance of other sequence analyses. | ||
| + | |||
| + | * https:// | ||
| + | * / | ||
| + | |||
| ====== OpenStructure ====== | ====== OpenStructure ====== | ||
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| * New java jdk-12.0.2 (by default in your path) | * New java jdk-12.0.2 (by default in your path) | ||
| * packages lme4 and tidyverse installed (dependencies=TRUE) | * packages lme4 and tidyverse installed (dependencies=TRUE) | ||
| + | * https:// | ||
| + | * packages: mice, rpart, party, caret, randomforest, | ||
| + | * note: had to make a link to omp.h from gcc 4.8.4 to OS native gcc...works? | ||
| < | < | ||
cluster/73.txt ยท Last modified: 2024/05/15 12:58 by hmeij07
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