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cluster:73 [2020/01/14 14:57]
hmeij07 [Paleogenomics Tools]
cluster:73 [2020/01/14 15:21]
hmeij07
Line 10: Line 10:
 Most of the compilations have been performed by Intel's icc/ifort compilers. Most of the compilations have been performed by Intel's icc/ifort compilers.
  
-The list of software was primarily compiled under RHEL5.1 but more recent compilation are done on host sharptail under RHEL5.5Newer compilations are done with CentOS 6.(since summer 2013) on either swallowtail or node n33.+Old compilations, mostly located in /share/apps, are RHEL 5.5 \\ 
 +Newer compilations are done with CentOS 6.10 (since summer 2013) \\ 
 +on either cottontail2 or node n33 located at /share/apps/CENTOS6 \\ 
 +Some compilations require 7.x and are in /share/apps/CENTOS7 \\
  
 ====== Paleogenomics Tools ====== ====== Paleogenomics Tools ======
Line 40: Line 43:
  
 </code> </code>
 +
 +  * https://www.beast2.org/
 +  * BEAST 2 is a cross-platform program for Bayesian phylogenetic analysis of molecular sequences. 
 +
 +<code>
 +
 +# with local java jre1.8.0_212
 +export PATH=/share/apps/CENTOS6/beast/2.6.0/bin:$PATH
 +
 +</code>
 +
  
 ====== CD-HIT ====== ====== CD-HIT ======
cluster/73.txt · Last modified: 2024/05/15 12:58 by hmeij07