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cluster:73 [2021/03/03 18:19]
hmeij07 [Mathematica]
cluster:73 [2021/03/11 19:47]
hmeij07 [Intel Threading Building Blocks]
Line 18: Line 18:
 on either cottontail2 or node n33 located at /share/apps/CENTOS6 \\ on either cottontail2 or node n33 located at /share/apps/CENTOS6 \\
 Some compilations require 7.x and are in /share/apps/CENTOS7 \\ Some compilations require 7.x and are in /share/apps/CENTOS7 \\
 +
 +====== OneAPI ======
 +
 +  * Requires CentOS 7 so queues mwgpu, amber128, exx96
 +
 +  * Production version is installed in /share/apps/CENTOS7/intel/openapi (via **n78**)
 +  * source /share/apps/CENTOS/intel/oneapi/setvars.sh
 +
 +<code>
 +# which icc icx icpc icpx dpcpp ifort ifx mpirun mpicc python clang clang++
 +/share/apps/CENTOS7/intel/oneapi/compiler/2021.1.1/linux/bin/intel64/icc
 +/share/apps/CENTOS7/intel/oneapi/compiler/2021.1.1/linux/bin/icx
 +/share/apps/CENTOS7/intel/oneapi/compiler/2021.1.1/linux/bin/intel64/icpc
 +/share/apps/CENTOS7/intel/oneapi/compiler/2021.1.1/linux/bin/icpx
 +/share/apps/CENTOS7/intel/oneapi/compiler/2021.1.1/linux/bin/dpcpp
 +/share/apps/CENTOS7/intel/oneapi/compiler/2021.1.1/linux/bin/intel64/ifort
 +/share/apps/CENTOS7/intel/oneapi/compiler/2021.1.1/linux/bin/ifx
 +/share/apps/CENTOS7/intel/oneapi/intelpython/latest/bin/mpirun
 +/share/apps/CENTOS7/intel/oneapi/mpi/2021.1.1/bin/mpicc
 +/share/apps/CENTOS7/intel/oneapi/intelpython/latest/bin/python
 +/share/apps/CENTOS7/intel/oneapi/compiler/2021.1.1/linux/bin/clang
 +/share/apps/CENTOS7/intel/oneapi/compiler/2021.1.1/linux/bin/clang++
 +# in addition these were installed
 +/share/apps/CENTOS7/intel/oneapi/mkl/2021.1.1
 +/share/apps/CENTOS7/intel/oneapi/pytorch/1.5.0
 +/share/apps/CENTOS7/intel/oneapi/tensorflow/2.2.0
 +</code>
 +
 +  * Test version is installed on local disk on host **greentail52**
 +  * source /opt/intel/oneapi/setvars.sh
 +  * Read [[cluster:203|ICC vs ICX]]
 +
 +
 +====== StringTie2 ======
 +
 +  * Requires CentOS 7 so queues mwgpu, amber128, exx96
 +  * /share/apps/CENTOS7/stringtie2/stringtie2 binarie
 +  * https://github.com/skovaka/stringtie2
  
 ====== Rstudio ====== ====== Rstudio ======
Line 3032: Line 3070:
  
 ====== Cluster Math Kernel Libraries ====== ====== Cluster Math Kernel Libraries ======
 +
 +  * latest version in OneAPI, search this page
  
   * see Intel parallel studio   * see Intel parallel studio
Line 3041: Line 3081:
  
 ====== Intel Threading Building Blocks ====== ====== Intel Threading Building Blocks ======
 +
 +  * latest version is in OneAPI, search this pages
  
   * see Intel parallel studio   * see Intel parallel studio
Line 3055: Line 3097:
  
   * program: Matlab, link to binary is 'matlab' in ''/share/apps/bin''   * program: Matlab, link to binary is 'matlab' in ''/share/apps/bin''
-    * R2020a, campus wide license so no more restrictions on licenses +    * R2020b, campus wide license so no more restrictions on licenses 
     * No Distributed Computing Engine or Matlab Parallel (for now)     * No Distributed Computing Engine or Matlab Parallel (for now)
-  * install dir: /share/apps/CENTOS7/matlab/R2020a+  * install dir: /share/apps/CENTOS7/matlab/R2020bISO
   * docs & www: http://mathworks.com   * docs & www: http://mathworks.com
 +  * CentOS7 required use on queues mwgpu, amber128 and exx96 
 +  * For GUI launch on greentail52
  
 Note: Note:
cluster/73.txt · Last modified: 2024/05/15 12:58 by hmeij07