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--- cluster:73 [2021/08/11 19:31]
hmeij07 [Paleogenomics Tools]
+++ cluster:73 [2021/08/19 12:22]
hmeij07 [Sequencing Tools #4]
@@ Line 18: / Line 18: @@
 on either cottontail2 or node n33 located at /share/apps/CENTOS6 \\
 Some compilations require 7.x and are in /share/apps/CENTOS7 \\
+====== Sequencing Tools #4 ======
+<code>
+# environment
+source /share/apps/CENTOS7/miniconda3/etc/profile.d/conda.sh
+export PATH=/share/apps/CENTOS7/miniconda3/bin:$PATH
+export LD_LIBRARY_PATH=/share/apps/CENTOS7/miniconda3/lib:$LD_LIBRARY_PATH
+    libgcc-7.2.0               |       h69d50b8_2         304 KB  conda-forge
+    samtools-1.7               |                1         1.0 MB  bioconda
+    bowtie2-2.2.5              |   py38hed8969a_7        11.8 MB  bioconda
+    perl-5.26.2                |    h36c2ea0_1008        15.4 MB  conda-forge
+    bedtools-2.30.0            |       hc088bd4_0        14.0 MB  bioconda
+</code>
 ====== Sequencing Tools #3 ======

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