User Tools

Site Tools


cluster:73

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision
Previous revision
Next revision Both sides next revision
cluster:73 [2021/08/19 12:22]
hmeij07 [Sequencing Tools #4]
cluster:73 [2021/08/19 12:36]
hmeij07 [Sequencing Tools #4]
Line 20: Line 20:
  
 ====== Sequencing Tools #4 ====== ====== Sequencing Tools #4 ======
 +
 +Added to miniconda3, see section "Miniconda3"
 +
 +  * Requires centos7 so queues mwgpu, amber128, exx96
 +    * debug server greentail52
 +    * PREFIX=/share/apps/CENTOS7/miniconda3
 +    * python 3.9
 +  * jcoolon lab
 +    
  
 <code> <code>
Line 35: Line 44:
     bedtools-2.30.0            |       hc088bd4_0        14.0 MB  bioconda     bedtools-2.30.0            |       hc088bd4_0        14.0 MB  bioconda
  
 +# cufflinks requires centos 6, weird, so also added to miniconda2,  
 +# see section "Kallisto & Trinity & FastQC"
  
 </code> </code>
cluster/73.txt · Last modified: 2024/05/15 12:58 by hmeij07