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cluster:73 [2021/08/30 17:48] hmeij07 [Paleogenomics Tools] |
cluster:73 [2021/09/28 18:27] hmeij07 [Paleogenomics Tools] |
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- | * **adapterremoval** https://adapterremoval.readthedocs.io/en/latest/ | + | * **adapterremoval** https://github.com/MikkelSchubert/adapterremoval |
* **bwa** https:// | * **bwa** https:// | ||
* **bowtie2** http:// | * **bowtie2** http:// | ||
- | These are all part of Miniconda3, to setup the environment consult | + | These are all part of Miniconda3 |
* https:// | * https:// | ||
+ | * queues: mwgpu, amber128, exx96, debug server greentail52 | ||
- | There is also a standalone version of bowtie at | + | They are also available via Miniconda2 (centos6), consult |
+ | |||
+ | * https:// | ||
+ | * queues: hp12, mw256fd, tinymem, debug server swallowtail | ||
< | < |