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cluster:73 [2023/06/01 14:24] hmeij07 [Sequencing Tools #3] |
cluster:73 [2023/06/27 20:41] hmeij07 [Matlab] |
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fasteners-0.18 mmtf-python-1.1.3 | fasteners-0.18 mmtf-python-1.1.3 | ||
mrcfile-1.4.3 msgpack-1.0.4 numpy-1.23.4 | mrcfile-1.4.3 msgpack-1.0.4 numpy-1.23.4 | ||
+ | |||
+ | </ | ||
+ | |||
+ | For **Lammps** (starrlab) 23April2023, | ||
+ | |||
+ | * / | ||
+ | * make yes-ml-pace | ||
+ | * make yes-gpu | ||
+ | * https:// | ||
+ | |||
+ | < | ||
+ | |||
+ | # Note: you must add this line to you env | ||
+ | export LD_LIBRARY_PATH=/ | ||
+ | |||
+ | # Note2: had to install 'conda install cudnn' and make two links | ||
+ | to higher level libraries (a must not do) | ||
+ | for libcudnn.so.8 and libcusolver.so.11 | ||
+ | |||
+ | [hmeij@greentail52 ~]$ which python | ||
+ | / | ||
+ | [hmeij@greentail52 ~]$ pip list | grep tensorflow | ||
+ | mesh-tensorflow | ||
+ | tensorflow | ||
+ | tensorflow-addons | ||
+ | tensorflow-datasets | ||
+ | tensorflow-estimator | ||
+ | tensorflow-gan | ||
+ | tensorflow-hub | ||
+ | tensorflow-io-gcs-filesystem 0.32.0 | ||
+ | tensorflow-metadata | ||
+ | tensorflow-probability | ||
+ | [hmeij@greentail52 ~]$ which pacemaker | ||
+ | / | ||
</ | </ | ||
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[[https:// | [[https:// | ||
+ | |||
+ | * program v13,2.1 installed | ||
+ | |||
+ | * program v13.2 installed | ||
* program: mcc, math, mathematica (v 12.2) | * program: mcc, math, mathematica (v 12.2) | ||
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* does **not** support openmp, look for the OpenHPC version for that | * does **not** support openmp, look for the OpenHPC version for that | ||
* 05/24/2023 remade with package CREATION added | * 05/24/2023 remade with package CREATION added | ||
+ | * also read miniconda3 section for tensorflow/ | ||
< | < | ||
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====== Matlab ====== | ====== Matlab ====== | ||
+ | * installed R2023a | ||
+ | * installed R2022a | ||
+ | |||
+ | * installed R2021a | ||
* program: Matlab, link to binary is ' | * program: Matlab, link to binary is ' | ||
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====== Stata ====== | ====== Stata ====== | ||
+ | |||
+ | * program stata[-mp|-se] in your $PATH, version 18 | ||
+ | * v17 will still run so add ' | ||
+ | * so that makes for 12 licenses 8-) | ||
* program: Stata v 17, 6-user network license, includes stata, stata-mp, stata-se | * program: Stata v 17, 6-user network license, includes stata, stata-mp, stata-se |