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--- cluster:73 [2023/06/27 20:38]
hmeij07 [Stata]
+++ cluster:73 [2023/07/04 12:24]
hmeij07 [Sequencing Tools #3]
@@ Line 346: / Line 346: @@
 ** Flye **
-Somewhat annoying, no miniconda3 package, so local install, use minconda3 environment as listed top of this section (python 3.9, gcc 9.2). Local building (without installation) on centos7 greentail52.
+Somewhat annoying, no miniconda3 package, (python 3.9, gcc 9.2). Local building (without installation) on centos7 greentail52.
   * v2.9.2 (June 2023)
@@ Line 384: / Line 384: @@
 </code>
-  * https://github.com/fenderglass/Flye
-  * miniconda3
-  * De novo assembler for single molecule sequencing reads using repeat graphs
-  * v2.8.3
-<code>
-# To activate this environment, use
-#     $ conda activate flye
-# To deactivate an active environment, use
-#     $ conda deactivate
-</code>
 ** Filtlong **
@@ Line 2123: / Line 2111: @@
 [[https://dokuwiki.wesleyan.edu/doku.php?id=cluster:119|GPU version]]
+  * program v13,2.1 installed
+  * program v13.2 installed
   * program: mcc, math, mathematica (v 12.2)
@@ Line 4215: / Line 4207: @@
 ====== Matlab ======
+  * installed R2023a
+  * installed R2022a
+  * installed R2021a
   * program: Matlab, link to binary is 'matlab' in ''/share/apps/bin''

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