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--- cluster:211 [2022/02/28 17:59]
hmeij07 [DMTCP CRAC]
+++ cluster:211 [2022/03/01 16:50] (current)
hmeij07 [DMTCP CRAC]
@@ Line 17: / Line 17: @@
 # env on node n79 CRAC-early-developmennt-master.zip
+# download
+wget https://github.com/DMTCP-CRAC/CRAC-early-development/archive/master.zip
+# unzip
+unzip ../dmtcp-crac-master.zip
+mv CRAC-early-development-master /share/apps/CENTOS7/dmtcp/3.0.0.b
+# gcc
+ export PATH=/share/apps/CENTOS7/gcc/9.2.0/bin:$PATH
+ export LD_LIBRARY_PATH=/share/apps/CENTOS7/gcc/9.2.0/lib64:\
+/share/apps/CENTOS7/gcc/9.2.0/libexec:\
+/share/apps/CENTOS7/gcc/9.2.0/lib:\
+$LD_LIBRARY_PATH
  export PATH=/share/apps/CENTOS7/openmpi/4.0.4/bin:$PATH
@@ Line 63: / Line 78: @@
 </code>
+Next gobble together a gpu program like lammps/amber and test on gpu. Or you may have to wait on new compute nodes to arrive with latest toolkit and redo. The libcublas links needs to be made on each node in  this queue ''n79'' belongs to.
+<code>
+# oh well, nice try
+cudaGetDeviceCount failed CUDA driver version is insufficient for CUDA runtime version
+# manual with amber20 example
+dmtcp_launch --new-coordinator \
+--coord-port 0 --port-file /sanscratch/checkpoints/111/port.txt \
+--ckptdir /sanscratch/checkpoints/111 --interval 600   pmemd.cuda \
+-O -o mdout.$LSB_JOBID -inf mdinfo.1K10 -x mdcrd.1K10 -r restrt.1K10 -ref inpcrd
+</code>
 \\

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