\\ **[[cluster:0|Back]]** ==== HPC Users Meeting ==== * Brief history * 2006 swallowtail (Dell PE1955, Infiniband, imw, emw) * 2010 greentail (HP gen6 blade servers, hp12) * 2013 sharptail (Microway storage, K20s, Infiniband, mw256/mwgpu) * 2014 mw256fd (Dell 2006 replacement with Supermicro nodes) * 2015 tinymem (Supermicro bare metal, expansion for serial jobs) * 2017 mw128 (first new faculty startup funds) * 2018 6/25 Today's meeting * Since 2006 * Grown from 256 to roughly 1,200 physical CPU cores * Processed 3,165,752 jobs (by 18jun2018) * Compute capacity over 60 teraflops (DPFP; 38 cpu side, 25 gpu side) * Total memory footprint is near 7.5 TB * About 500 accounts have been created (incl 22 collaborator and 100 class accounts) * Funding / charge scheme: is it working for you? * Last 2 years, $15K target realized each year. * Status of our cluster development fund * $140K come July 1st, 2018 * Time for some new hardware? Retirement of hp12 nodes? * 2017 Benchmarks of some new hardware * Donation led to purchase of a commercial grade GPU server containing four GTX1080ti GPUs * Amber 16. Nucleosome bench runs 4.5x faster than on a K20 * Gromacs 5.1.4. Colin's multidir bench runs about 2x faster than on a K20 * Lammps 11Aug17. Colloid example runs about 11x faster than on a K20 * FSL 5.0.10. BFT bedpostx tests run 16x faster on CPU, a whopping 118x faster on GPU vs CPU. * Price of 128gb node in 2017 was $8,250...price of 256gb node in 2018 is $10,500 * 2016 IBM bought Platform Inc (developers of LSF, Openlava is LSF4.2 open source branch) * IBM promptly accused Openlava of copyright infringement in v3/v4 (US DMCA law, no proof needed). * Fall back option to v2.2 (definitely free of infringement, minor disruption) * Move forward option, adopt SLURM (LBL developers, major disruption) * If we adopt SLURM should we transition to OpenHPC Warewulf/SLURM recipe? * http://openhpc.community/ * new login node and couple compute nodes to start? * New HPC Advisory Group Member * Tidbits * Bought deep U42 rack with AC cooling onboard and two PDUs * Pushed Angstrom rack (bss24) out of our area, ready to recycle that (Done. 06/20/2018) * Currently we have two U42 racks empty with power * Cooling needs to be provided with any new major purchases (provost, ITS, HPC?) * 60 TB raw storage purchased for sharptail (/home2 for users with specific needs) * Everything is out of warranty but * cottontail (03/2019), * ringtail & n78 (10/2020) * mw128_nodes & shartptaildr (06/2020) * All Infiniband ports are in use ===== Notes ===== * First make a page comparing CPU vs GPU usage which may influence future purchase [[cluster:167|CPU vs GPU]] * $100k quote, 3to5 vendors, data points mid-2018 * One node (or all) should have configured on it: amber, gromacs, laamps, namd, latest version * Nvidia latest version, optimal configs cpu:gpu ratios * Amber 1:1 (may be 1:2 in future releases) - amber certified GPU! * Gromacs 10:1 (could ramp up to claiming all resources per node) * Namd 13:1 (could ramp up to claiming all resources per node) * Lammps 2-4:1 * 128g with enough CPU slots to take over ''hp12'': double ten core minimum * Anticipated target (also to manage heat exchange) * 2x10 Xeon CPU (~100gb left) with 2xgtx1080ti GPU (25gb memory required) * as many as fit budget but but no more than 15 rack wise \\ **[[cluster:0|Back]]**