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--- cluster:106 [2012/07/10 10:51]
hmeij created
+++ cluster:106 [2012/07/10 14:30]
hmeij
@@ Line 10: / Line 10: @@
 ==== Sample ====
-* save in a script abnd submit to scheduler
+* save in a script and submit to scheduler
 <code>
 #!/bin/bash
@@ Line 25: / Line 24: @@
 #BSUB -q stata
-#BSUB -R "span[hosts=1]"
 #BSUB -J test
 #BSUB -o out
 #BSUB -e err
-# use all cores per node
+# use n cores (job slots) ... a license limitation of 6
-# note the span forces all on one node or use the -x flag
+#BSUB -n 6
-#BSUB -n 8
+# force using all on one node (hosts=1) or use the -x flag
-# can stata-mp work across nodes?
+#BSUB -R "span[hosts=1]"
+# can stata-mp work across nodes?
+# it appears not so (only one out of 3 hosts ran stata-mp).
 # if so, raise the hosts=value or control
-# process per node with span=value
+# nr of processes per node with tile=value
+####BSUB -R "span[ptile=2]"
 # scratch dirs
 MYSANSCRATCH=/sanscratch/$LSB_JOBID
 MYLOCALSCRATCH=/localscratch/$LSB_JOBID
-export PATH
+# required in 12
+export PATH=/share/apps/stata/12:$PATH
 # alternate workdir, stage data and/or retrieve results
@@ Line 49: / Line 53: @@
 # working in home dir
-/share/apps/stata/10/stata-mp -b do firm_analysis_cluster
+/share/apps/stata/12/stata-mp -b do firm_analysis_cluster

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