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--- cluster:106 [2012/07/10 10:51]
hmeij created
+++ cluster:106 [2016/11/21 15:22] (current)
hmeij07 [Sample]
@@ Line 10: / Line 10: @@
 ==== Sample ====
-* save in a script abnd submit to scheduler
+* save in a script say called ''run'' and submit to scheduler ''bsub < run''
 <code>
 #!/bin/bash
@@ Line 22: / Line 21: @@
 # find queues: bqueues
 # submit job: bsub < run
-# jobs submmitted: bjobs
+# show jobs submitted: bjobs
 #BSUB -q stata
-#BSUB -R "span[hosts=1]"
 #BSUB -J test
 #BSUB -o out
 #BSUB -e err
-# use all cores per node
+# use n cores (job slots) ... a license limitation of 6
-# note the span forces all on one node or use the -x flag
+#BSUB -n 6
-#BSUB -n 8
+# force using all on one node (hosts=1)
-# can stata-mp work across nodes?
+#BSUB -R "span[hosts=1]"
-# if so, raise the hosts=value or control
-# process per node with span=value
+# can stata-mp work across nodes?
+# it appears not
 # scratch dirs
 MYSANSCRATCH=/sanscratch/$LSB_JOBID
 MYLOCALSCRATCH=/localscratch/$LSB_JOBID
-export PATH
+# required in 12
+export PATH=/share/apps/stata/12:$PATH
 # alternate workdir, stage data and/or retrieve results
 # cd $MYSANSCRATCH
-# cp ~/stata/AllRegions2.dta  ~/stata/nikkei1.dta .
+# cp ~/stata/AllRegions2.dta  ~/stata/nikkei1.dta  .
 # /share/apps/stata/10/stata-mp -b do wagepan80_87
-# assumes output is written back to home, else copy back
+# assumes output is written back to home, else copy results to ~/stata/
 # working in home dir
-/share/apps/stata/10/stata-mp -b do firm_analysis_cluster
+cd ~/stata/
+/share/apps/stata/12/stata-mp -b do firm_analysis_cluster

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