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cluster:125 [DokuWiki]

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cluster:125

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cluster:125 [2014/02/25 14:25]
hmeij [What May Also Change?]
cluster:125 [2014/02/26 15:32]
hmeij [What Changes?]
Line 35: Line 35:
 #BSUB -R "rusage[mem=X]" #BSUB -R "rusage[mem=X]"
 </code> </code>
 +
 +  * How do I find out how much memory I'm using? ssh node_name top -u your_name -b -n 1
  
 Gaussian: Gaussian:
Line 51: Line 53:
   * You can use the new queue ''mw256fd'' just like ''hp12'' or ''imw''   * You can use the new queue ''mw256fd'' just like ''hp12'' or ''imw''
   * For parallel programs you may use OpenMPI or MVApich, use the appropriate wrapper scripts to set up the environment for mpirun   * For parallel programs you may use OpenMPI or MVApich, use the appropriate wrapper scripts to set up the environment for mpirun
 +    * On ''mw256'' you may run either flavor of MPI with the appropriate binaries.
   * On ''mwgpu'' you must use MVApich2 when running the GPU enabled software (Amber, Gromacs, Lammps, Namd).   * On ''mwgpu'' you must use MVApich2 when running the GPU enabled software (Amber, Gromacs, Lammps, Namd).
-  * On ''mw256'' you may run either flavor of MPI with the appropriate binaries.+
  
 Scratch: Scratch:
cluster/125.txt ยท Last modified: 2014/02/26 15:32 by hmeij