cluster:126
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cluster:126 [2020/07/28 13:10] hmeij07 |
cluster:126 [2020/07/28 13:17] hmeij07 |
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| * hp12 is the default queue | * hp12 is the default queue | ||
| * for processing lots of small to medium memory footprint jobs | * for processing lots of small to medium memory footprint jobs | ||
| - | * mwgpu is for GPU enabled software primarily (Amber, Lammps, NAMD, Gromacs, Matlab, Mathematica) | + | * mwgpu is for GPU (K20) enabled software primarily (Amber, Lammps, NAMD, Gromacs, Matlab, Mathematica) |
| * be sure to reserve one or more job slot for each GPU used [[cluster: | * be sure to reserve one or more job slot for each GPU used [[cluster: | ||
| * be sure to use the correct wrapper script to set up mpirun from mvapich2, mpich3 or openmpi | * be sure to use the correct wrapper script to set up mpirun from mvapich2, mpich3 or openmpi | ||
| Line 97: | Line 97: | ||
| * Be sure to use mpich3 for Amber | * Be sure to use mpich3 for Amber | ||
| * Priority access for Amber jobs till 10/01/2020 | * Priority access for Amber jobs till 10/01/2020 | ||
| - | * test (swallowtail, | + | * test (swallowtail, |
| * wall time of 8 hours of CPU usage | * wall time of 8 hours of CPU usage | ||
| - | **There are no wall time limits in our HPCC environment except for queue '' | + | **There are no wall time limits in our HPCC environment except for queue '' |
| ===== Other Stuff ===== | ===== Other Stuff ===== | ||
| Line 114: | Line 114: | ||
| For HPCC acknowledgements consult [[cluster: | For HPCC acknowledgements consult [[cluster: | ||
| - | Sample scripts for job submissions (serial, array, parallel, forked and gpu) can be found at ''/ | + | Sample scripts for job submissions (serial, array, parallel, forked and gpu) can be found at ''/ |
| - | From off-campus you need to VPN in first at [[http:// | + | From off-campus you need to VPN in first, download GlobalProtect client |
cluster/126.txt ยท Last modified: 2023/10/23 15:37 by hmeij07
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