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cluster:137 [2015/03/18 15:18]
hmeij
cluster:137 [2019/06/12 12:58]
hmeij07
Line 1: Line 1:
 \\ \\
 **[[cluster:0|Back]]** **[[cluster:0|Back]]**
 +
 +
 +==== Submitting R2017+ Jobs ====
 +
 +Wesleyan has obtained a campus wide site license for Matlab since version 2017.  Hence there is no need to check out a license and the queue ''matlab'' has been removed. You can use version 2017 and onward on all queues in unlimited number off jobs. Your submit script should do something simple like
 +
 +<code>
 +#!/bin/bash
 +# create this file then submit
 +# submit via 'bsub < run.sh'
 +
 +#BSUB -q tinymem
 +#BSUB -J test
 +#BSUB -o out
 +#BSUB -e err
 +# match maxNumCompThreads(8); in matlab code
 +#BSUB -n 8
 +# all cores on single host
 +
 +
 +export PATH=/share/apps/CENTOS6/matlab/R2017b/bin:$PATH
 +
 +matlab -nodisplay < myJob.m  > myJob.log
 +
 +</code>
 +
  
  
 ==== Submitting R2015a Jobs ==== ==== Submitting R2015a Jobs ====
  
-With MATLAB's Distributed Computing Server+2015 Matlab DCE has been uninstalled 
 + --- //[[hmeij@wesleyan.edu|Henk]] 2018/08/30 08:01//
  
 +**MATLAB's Distributed Computing Server R2015a requires CentOS6 so launch on swallowtail or petaltail and use all queues but not ''hp12''.
 +**
 Ever since Matlab R2008a, I've been copying the "lsf" integration files forward from release to release to get parallel job submissions working for Lava (v1.x).  Every upgrade I ask for Lava integration support instead of having to use generic integration files. Ever since Matlab R2008a, I've been copying the "lsf" integration files forward from release to release to get parallel job submissions working for Lava (v1.x).  Every upgrade I ask for Lava integration support instead of having to use generic integration files.
  
cluster/137.txt · Last modified: 2019/06/12 13:00 by hmeij07