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cluster:180 [2019/07/18 08:19]
hmeij07 		cluster:180 [2019/07/31 14:56] (current)
hmeij07
Line 32: Line 32:
 -- Found FFTW: /share/apps/CENTOS6/fftw/3.3.8-enable-single/lib/libfftw3f.so -- Found FFTW: /share/apps/CENTOS6/fftw/3.3.8-enable-single/lib/libfftw3f.so
 -- Found TIFF: /share/apps/CENTOS6/tiff/4.0.9/lib/libtiff.so (found version "4.0.9") -- Found TIFF: /share/apps/CENTOS6/tiff/4.0.9/lib/libtiff.so (found version "4.0.9")
 +
 +
 +
 +# setup the environment
 +egrep ^export /share/apps/CENTOS6/openstructure/1.9-install.txt
 +
 +# invoke CLI
 +ost --help
 +Usage:
 +
 +    ost [ost options] [script to execute] [script parameters]
 +
 +or
 +    ost [action name] [action options]
 +
  
 </code> </code>
 +
  
 ====== Compilations ====== ====== Compilations ======
Line 46: Line 62:
 export PATH=/share/apps/CENTOS6/cmake/3.12.1/bin:$PATH export PATH=/share/apps/CENTOS6/cmake/3.12.1/bin:$PATH
  
-tar zxvf ../Python-2.7.15.tgz                                                                                                       +tar zxvf ../Python-2.7.15.tgz
 cd Python-2.7.15/  cd Python-2.7.15/ 
-./configure --prefix=/share/apps/CENTOS6/python/2.7.15 --enable-shared                                                              +./configure --prefix=/share/apps/CENTOS6/python/2.7.15 --enable-shared
 export PATH=/share/apps/CENTOS6/python/2.7.15/bin:$PATH export PATH=/share/apps/CENTOS6/python/2.7.15/bin:$PATH
 export LD_LIBRARY_PATH=/share/apps/CENTOS6/python/2.7.15/lib:$LD_LIBRARY_PATH export LD_LIBRARY_PATH=/share/apps/CENTOS6/python/2.7.15/lib:$LD_LIBRARY_PATH
-python ../get-pip.py                                                                                                                +python ../get-pip.py
 pip install numpy scipy  pip install numpy scipy 
  
Line 144: Line 160:
 </code> </code>
  
 +Remarkably complex compilations.
  
 +Notes (from developers):
  
-# setup the environment +With the 1.10 release, you won't need the "brute fix for boost to find libs anymore. This page instructions to be for 1.9 by either doing a "git checkout 1.9.0" after "cd openstructure-1.9" or by fetching a tagged tar ball directly (in gitlab, the URL for that would be \\ https://git.scicore.unibas.ch/schwede/openstructure/repository/1.9.0/archive.tar.gz \\ 
-egrep ^export /share/apps/CENTOS6/openstructure/1.9-install.txt +where "1.9.0" can be replaced with any git-tag).
- +
-ost --help +
-Usage: +
- +
-    ost [ost options] [script to execute] [script parameters] +
- +
-or +
-    ost [action name] [action options] +
- +
- +
-</code> +
- +
-Remarkably complex compilations.+
  
 ====== cmake.log ====== ====== cmake.log ======
Line 248: Line 253:
 </code> </code>
  
 +\\
 +**[[cluster:0|Back]]**
  
  
cluster/180.1563452389.txt.gz · Last modified: 2019/07/18 08:19 by hmeij07

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