cluster:213
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cluster:213 [2022/07/25 11:10] hmeij07 [Amber22] |
cluster:213 [2022/07/25 14:52] hmeij07 [Amber22] |
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| Line 373: | Line 373: | ||
| # copy head node's amber22_src/ | # copy head node's amber22_src/ | ||
| + | |||
| + | |||
| + | source / | ||
| + | echo $AMBERHOME | ||
| # install latest openmpi version | # install latest openmpi version | ||
| Line 378: | Line 382: | ||
| tar xvfj ../ | tar xvfj ../ | ||
| + | ./ | ||
| + | # on n100 now, parallel, set | ||
| + | -MPI=TRUE | ||
| + | -DDOWNLOAD_MINICONDA=FALSE | ||
| + | ./run_cmake | ||
| + | make install | ||
| + | # on n100 just change cuda flag | ||
| + | [hmeij@n100 build]$ module load cuda/11.6 | ||
| + | [hmeij@n100 build]$ which gcc mpicc nvcc | ||
| + | / | ||
| + | / | ||
| + | / | ||
| + | [hmeij@n100 ~]$ echo $CUDA_HOME | ||
| + | / | ||
| - | # Env | + | -MPI=TRUE |
| + | -CUDA=TRUE | ||
| + | -DDOWNLOAD_MINICONDA=FALSE | ||
| + | ./ | ||
| + | make install | ||
| - | [hmeij@n100 ~]$ module load cuda/11.6 | ||
| - | |||
| - | [hmeij@n100 ~]$ echo $CUDA_HOME | ||
| - | / | ||
| [hmeij@n100 ~]$ which nvcc mpicc gcc | [hmeij@n100 ~]$ which nvcc mpicc gcc | ||
| Line 394: | Line 412: | ||
| / | / | ||
| / | / | ||
| - | |||
| - | # [FIXED} cmake error on conda install, set to FALSE | ||
| - | # OS native python, install on n[100-101] | ||
| - | -- Python version 3.9 -- OK | ||
| - | -- Found PythonLibs: / | ||
| - | -- Checking for Python package numpy -- not found | ||
| - | -- Checking for Python package scipy -- not found | ||
| - | -- Checking for Python package matplotlib -- not found | ||
| - | -- Checking for Python package setuptools -- found | ||
| - | [END FIXED] | ||
| - | |||
| - | # mpi & cuda FALSE builds serial | ||
| - | ./run_cmake | ||
| - | make install | ||
| - | # lots and lots of warnings | ||
| - | |||
| - | # then | ||
| - | source / | ||
| - | |||
| - | # on n100 now, parallel, set miniconda flags to FALSE | ||
| - | -MPI=TRUE | ||
| - | ./run_cmake | ||
| - | make install | ||
| - | |||
| - | # on n100 just change cuda flag | ||
| - | -CUDA=TRUE | ||
| - | ./run_cmake | ||
| - | make install | ||
| #tests | #tests | ||
cluster/213.txt · Last modified: 2024/01/12 10:09 by hmeij07
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