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cluster:73 [DokuWiki]

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cluster:73 [2022/04/26 13:12]
hmeij07 [Paleogenomics Tools]
cluster:73 [2022/06/28 11:37]
hmeij07 [Kallisto & Trinity & FastQC]
Line 966: Line 966:
   * **PCAngsd**, requires miniconda3's python   * **PCAngsd**, requires miniconda3's python
   * https://github.com/Rosemeis/pcangsd   * https://github.com/Rosemeis/pcangsd
-  * apparently the repo is needed ''share/apps/CENTOS7/pcangsd/1.1.0''+  * apparently the repo is needed ''/share/apps/CENTOS7/pcangsd/1.1.0''
  
 <code> <code>
Line 1355: Line 1355:
 cufflinks                 2.2.1                    py27_2    bioconda cufflinks                 2.2.1                    py27_2    bioconda
 samtools                  1.13                 h8c37831_0     samtools                  1.13                 h8c37831_0    
 +
 +# fcohan lab
 +[hmeij@petaltail ~]$ iqtree --version
 +IQ-TREE multicore version 2.1.4-beta COVID-edition for Linux 64-bit built Jun 24 2021
  
 </code> </code>
 +
 +
  
 **Trinity** assembles transcript sequences from Illumina RNA-Seq data. **Trinity** assembles transcript sequences from Illumina RNA-Seq data.
cluster/73.txt ยท Last modified: 2024/02/16 11:17 by hmeij07