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cluster:73 [DokuWiki]

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cluster:73 [2022/04/26 16:21]
hmeij07 [Paleogenomics Tools]
cluster:73 [2022/08/03 10:38]
hmeij07 [Amber]
Line 659: Line 659:
 Using htslib 1.9 Using htslib 1.9
 Copyright (C) 2018 Genome Research Ltd. Copyright (C) 2018 Genome Research Ltd.
 +
 +</code>
 +
 +  * **iqtree** fcohanlab/jwang06
 +
 +<code>
 +
 +[hmeij@greentail52 ~]$ iqtree --version
 +IQ-TREE multicore version 2.0.3 for Linux 64-bit built Dec 20 2020
 +
  
 </code> </code>
Line 1355: Line 1365:
 cufflinks                 2.2.1                    py27_2    bioconda cufflinks                 2.2.1                    py27_2    bioconda
 samtools                  1.13                 h8c37831_0     samtools                  1.13                 h8c37831_0    
 +
 +# fcohan lab
 +[hmeij@petaltail ~]$ iqtree --version
 +IQ-TREE multicore version 2.1.4-beta COVID-edition for Linux 64-bit built Jun 24 2021
  
 </code> </code>
 +
 +
  
 **Trinity** assembles transcript sequences from Illumina RNA-Seq data. **Trinity** assembles transcript sequences from Illumina RNA-Seq data.
Line 3246: Line 3262:
  
 ====== Amber ======  ====== Amber ====== 
 +
 +** Amber 22 **
 +
 +Details on how to run on CentOS7 can be found at
 +
 +  * https://dokuwiki.wesleyan.edu/doku.php?id=cluster:214#amber22
  
 ** Amber 20 ** ** Amber 20 **
cluster/73.txt ยท Last modified: 2024/05/09 14:50 by hmeij07