cluster:218
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cluster:218 [2022/08/29 13:17] hmeij07 [CentOS7 Slurm Template] |
cluster:218 [2025/06/19 15:43] (current) hmeij07 |
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| Line 93: | Line 93: | ||
| < | < | ||
| + | |||
| + | Account | ||
| + | #SBATCH --account=pifacultyusername | ||
| NODE control | NODE control | ||
| Line 101: | Line 104: | ||
| #SBATCH -B 2:4:1 # S: | #SBATCH -B 2:4:1 # S: | ||
| #SBATCH --mem=250 | #SBATCH --mem=250 | ||
| - | #SBATCH --ntasks-per-node=1 # needed to override oversubscribe | + | #SBATCH --ntasks-per-node=1 # perhaps |
| #SBATCH --cpus-per-task=1 | #SBATCH --cpus-per-task=1 | ||
| Line 121: | Line 124: | ||
| </ | </ | ||
| + | |||
| + | ** Pending Jobs ** | ||
| + | |||
| + | I keep having to inform users that with -n 1 and -cpu 1 your job can still go in pending state because user forgot to reserve memory ... so silly slurm assumes your job needs all the node's memory. Here is my template then | ||
| + | |||
| + | < | ||
| + | |||
| + | FirstName, your jobs are pending because you did not request memory | ||
| + | and if not then slurm assumes you need all memory, silly. | ||
| + | Command " | ||
| + | |||
| + | JobId=1062052 JobName=3a_avgHbond_CPU | ||
| + | | ||
| + | | ||
| + | |||
| + | I looked (command "ssh n?? top -u username -b -n 1", look for the VIRT value) | ||
| + | and you need less than 1G per job so with --mem=1024 and n=1 and cpu=1 | ||
| + | you should be able to load 48 jobs onto n100. | ||
| + | Consult output of command "sinfo -lN" | ||
| + | |||
| + | </ | ||
| + | |||
| ==== MPI ==== | ==== MPI ==== | ||
| Line 369: | Line 394: | ||
| # | # | ||
| # GENERAL | # GENERAL | ||
| + | #SBATCH --account=pifacultyusername | ||
| #SBATCH --job-name=" | #SBATCH --job-name=" | ||
| #SBATCH --output=out | #SBATCH --output=out | ||
| Line 485: | Line 511: | ||
| # | # | ||
| # GENERAL | # GENERAL | ||
| + | #SBATCH --account=pifacultyusername | ||
| #SBATCH --job-name=" | #SBATCH --job-name=" | ||
| #SBATCH --output=out | #SBATCH --output=out | ||
cluster/218.1661779031.txt.gz · Last modified: 2022/08/29 13:17 by hmeij07
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