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Slurm Consumable Resources

It is important to define as many resources your job needs to run. This allows Slurm to run multiple jobs per node if resources are available (given our configuration).

Monitoring the allocated resources to your job will provide feedback if your #SBATCH specifications actually do what you think they should do.

You can control the output of squeue for a more refined look than the default layout. Here are some examples.

# compact1
export SQUEUE_FORMAT2=jobid:8,partition:10,name:.12,username:.14,statecompact:.4,timeused:.14,numnodes:.6,numcpus:.6,minmemory:.14,reasonList:.17

# ouput
JOBID   PARTITION         NAME          USER  ST          TIME NODES  CPUS    MIN_MEMORY NODELIST(REASON)
1006369 exx96     5JUP_N2_GGG_        ehwane  PD          0:00     1     1             0       (Priority)
1006368 exx96     5JUP_N2_GGG_        ehwane  PD          0:00     1     1             0       (Priority)
1006367 exx96     5JUP_N2_GGG_        ehwane  PD          0:00     1     1             0       (Priority)
1006366 exx96     5JUP_N2_GGG_        ehwane  PD          0:00     1     1             0      (Resources)
1006362 exx96      cp2k-796-d2      earbauge   R       1:30:23     1     9        30000M              n80
1006348 exx96     5JUP_N2_GGG_        ehwane   R       5:43:10     1     1             0              n87
1006331 exx96     5JUP_N2_GGG_        ehwane   R    1-02:31:28     1     1             0              n86
1006330 exx96     5JUP_N2_GGG_        ehwane   R    1-02:31:33     1     1             0              n85
1006329 exx96     5JUP_N2_GGG_        ehwane   R    1-02:31:47     1     1             0              n84
1006328 exx96     5JUP_N2_GGG_        ehwane   R    1-02:31:54     1     1             0              n83
1006323 exx96     5JUP_N2_GGG_        ehwane   R    1-03:04:49     1     1             0              n82
1006321 exx96      cp2k-796-d2      earbauge   R    1-03:49:45     1     9        30000M              n81
1006228 exx96      cp2k-796-d2      earbauge   R    2-00:03:55     1     9        30000M              n90
1006227 exx96      cp2k-796-d2      earbauge   R    2-00:04:55     1     9        30000M              n79
1006128 exx96     blyp-otf-str      earbauge   R    3-04:23:15     1     9        30000M              n79
1005937 exx96     blyp-otf-str      earbauge   R    4-20:19:46     1     9        30000M              n81
1005936 exx96     blyp-otf-str      earbauge   R    6-03:01:51     1     9        30000M              n80
1005320 exx96     blyp-otf-str      earbauge   R   12-19:51:32     1     9        30000M              n88
1005189 exx96       Hmass_MutS      ejayarae   R   13-04:23:40     1     1             0              n89
1004988 exx96       7_aMD_MutS      ejayarae   R   14-22:33:10     1    24             0              n89
1004757 exx96     set1_9_3_ext      ejayarae   R   19-21:03:57     1    24             0              n89
1004755 exx96     7_duplicate2      ejayarae   R   19-21:11:16     1    24             0              n89
1005933 mw128     trianthracen     emiseljie   R    6-03:50:08     1     8             0              n65
1005930 mw128     trianthracen     emiseljie   R    6-03:50:17     1     8             0              n62
1006376 test      trail4_GDP1_      ejayarae   R          0:03     1     1             0             n100
1006375 test      trail4_GDP1_      ejayarae   R          0:09     1     1             0             n100
1006374 test      trail4_GDP1_      ejayarae   R          0:16     1     1             0             n100
1006373 test      trail4_GDP1_      ejayarae   R         20:27     1     1             0             n100e

# compact2
export SQUEUE_FORMAT2=jobid:8,numnodes:.6,numcpus:.6,sockets:.18,cores:.18,threads:.18,minmemory:.14,gres:.30,reasonList:.17


# output
JOBID    NODES  CPUS  SOCKETS_PER_NODE  CORES_PER_SOCKET  THREADS_PER_CORE    MIN_MEMORY                 TRES_PER_NODE NODELIST(REASON)
1006369      1     1                 1                 1                 1             0                           N/A       (Priority)
1006368      1     1                 1                 1                 1             0                           N/A       (Priority)
1006367      1     1                 1                 1                 1             0                           N/A       (Priority)
1006366      1     1                 1                 1                 1             0                           N/A      (Resources)
1006362      1     9                 *                 *                 *        30000M                           N/A              n80
1006348      1     1                 1                 1                 1             0                           N/A              n87
1006331      1     1                 1                 1                 1             0                           N/A              n86
1006330      1     1                 1                 1                 1             0                           N/A              n85
1006329      1     1                 1                 1                 1             0                           N/A              n84
1006328      1     1                 1                 1                 1             0                           N/A              n83
1006323      1     1                 1                 1                 1             0                           N/A              n82
1006321      1     9                 *                 *                 *        30000M                           N/A              n81
1006228      1     9                 *                 *                 *        30000M                           N/A              n90
1006227      1     9                 *                 *                 *        30000M                           N/A              n79
1006128      1     9                 *                 *                 *        30000M                           N/A              n79
1005937      1     9                 *                 *                 *        30000M                           N/A              n81
1005936      1     9                 *                 *                 *        30000M                           N/A              n80
1005320      1     9                 *                 *                 *        30000M                           N/A              n88
1005189      1     1                 1                 1                 1             0 gres:gpu:geforce_rtx_2080_s:1              n89
1004988      1    24                 1                 1                 1             0 gres:gpu:geforce_rtx_2080_s:1              n89
1004757      1    24                 1                 1                 1             0 gres:gpu:geforce_rtx_2080_s:1              n89
1004755      1    24                 1                 1                 1             0 gres:gpu:geforce_rtx_2080_s:1              n89
1005933      1     8                 *                 *                 *             0                           N/A              n65
1005930      1     8                 *                 *                 *             0                           N/A              n62
1006380      1     1                 1                 1                 1             0    gres:gpu:quadro_rtx_5000:1             n101
1006379      1     1                 1                 1                 1             0    gres:gpu:quadro_rtx_5000:1             n101
1006378      1     1                 1                 1                 1             0    gres:gpu:quadro_rtx_5000:1             n101
1006377      1     1                 1                 1                 1             0    gres:gpu:quadro_rtx_5000:1             n101
1006376      1     1                 1                 1                 1             0    gres:gpu:quadro_rtx_5000:1             n100
1006375      1     1                 1                 1                 1             0    gres:gpu:quadro_rtx_5000:1             n100
1006374      1     1                 1                 1                 1             0    gres:gpu:quadro_rtx_5000:1             n100
1006373      1     1                 1                 1                 1             0    gres:gpu:quadro_rtx_5000:1             n100


# 1+2
#export SQUEUE_FORMAT2=jobid:8,partition:10,name:.12,username:.14,statecompact:.4,timeused:.14,numnodes:.6,numcpus:.6,sockets:.18,cores:.18,threads:.18,minmemory:.14,gres:.30,reasonList:.17


# output 
JOBID   PARTITION         NAME          USER  ST          TIME NODES  CPUS  SOCKETS_PER_NODE  CORES_PER_SOCKET  THREADS_PER_CORE    MIN_MEMORY                 TRES_PER_NODE NODELIST(REASON)
1006369 exx96     5JUP_N2_GGG_        ehwane  PD          0:00     1     1                 1                 1                 1             0                           N/A       (Priority)
1006368 exx96     5JUP_N2_GGG_        ehwane  PD          0:00     1     1                 1                 1                 1             0                           N/A       (Priority)
1006367 exx96     5JUP_N2_GGG_        ehwane  PD          0:00     1     1                 1                 1                 1             0                           N/A       (Priority)
1006366 exx96     5JUP_N2_GGG_        ehwane  PD          0:00     1     1                 1                 1                 1             0                           N/A      (Resources)
1006362 exx96      cp2k-796-d2      earbauge   R       1:26:20     1     9                 *                 *                 *        30000M                           N/A              n80
1006348 exx96     5JUP_N2_GGG_        ehwane   R       5:39:07     1     1                 1                 1                 1             0                           N/A              n87
1006331 exx96     5JUP_N2_GGG_        ehwane   R    1-02:27:25     1     1                 1                 1                 1             0                           N/A              n86
1006330 exx96     5JUP_N2_GGG_        ehwane   R    1-02:27:30     1     1                 1                 1                 1             0                           N/A              n85
1006329 exx96     5JUP_N2_GGG_        ehwane   R    1-02:27:44     1     1                 1                 1                 1             0                           N/A              n84
1006328 exx96     5JUP_N2_GGG_        ehwane   R    1-02:27:51     1     1                 1                 1                 1             0                           N/A              n83
1006323 exx96     5JUP_N2_GGG_        ehwane   R    1-03:00:46     1     1                 1                 1                 1             0                           N/A              n82
1006321 exx96      cp2k-796-d2      earbauge   R    1-03:45:42     1     9                 *                 *                 *        30000M                           N/A              n81
1006228 exx96      cp2k-796-d2      earbauge   R    1-23:59:52     1     9                 *                 *                 *        30000M                           N/A              n90
1006227 exx96      cp2k-796-d2      earbauge   R    2-00:00:52     1     9                 *                 *                 *        30000M                           N/A              n79
1006128 exx96     blyp-otf-str      earbauge   R    3-04:19:12     1     9                 *                 *                 *        30000M                           N/A              n79
1005937 exx96     blyp-otf-str      earbauge   R    4-20:15:43     1     9                 *                 *                 *        30000M                           N/A              n81
1005936 exx96     blyp-otf-str      earbauge   R    6-02:57:48     1     9                 *                 *                 *        30000M                           N/A              n80
1005320 exx96     blyp-otf-str      earbauge   R   12-19:47:29     1     9                 *                 *                 *        30000M                           N/A              n88
1005189 exx96       Hmass_MutS      ejayarae   R   13-04:19:37     1     1                 1                 1                 1             0 gres:gpu:geforce_rtx_2080_s:1              n89
1004988 exx96       7_aMD_MutS      ejayarae   R   14-22:29:07     1    24                 1                 1                 1             0 gres:gpu:geforce_rtx_2080_s:1              n89
1004757 exx96     set1_9_3_ext      ejayarae   R   19-20:59:54     1    24                 1                 1                 1             0 gres:gpu:geforce_rtx_2080_s:1              n89
1004755 exx96     7_duplicate2      ejayarae   R   19-21:07:13     1    24                 1                 1                 1             0 gres:gpu:geforce_rtx_2080_s:1              n89
1005933 mw128     trianthracen     emiseljie   R    6-03:46:05     1     8                 *                 *                 *             0                           N/A              n65
1005930 mw128     trianthracen     emiseljie   R    6-03:46:14     1     8                 *                 *                 *             0                           N/A              n62
1006373 test      trail4_GDP1_      ejayarae   R         16:24     1     1                 1                 1                 1             0    gres:gpu:quadro_rtx_5000:1             n100


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cluster/219.txt · Last modified: 2022/11/16 09:01 by hmeij07